HL_7Q4K_059

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7Q4K|1|BA|A|1067, 7Q4K|1|BA|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q4K_059 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2188

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7Q4K|1|BA|C|1064
7Q4K|1|BA|U|1065
7Q4K|1|BA|U|1066
7Q4K|1|BA|A|1067
7Q4K|1|BA|G|1068
7Q4K|1|BA|A|1069
7Q4K|1|BA|A|1070
7Q4K|1|BA|G|1071
7Q4K|1|BA|C|1072
7Q4K|1|BA|A|1073
7Q4K|1|BA|G|1074

Current chains

Chain BA

23S rRNA

Nearby chains