HL_7Q4K_081

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

7Q4K|1|BA|A|2031, 7Q4K|1|BA|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q4K_081 not in the Motif Atlas

Homologous match to HL_5J7L_183

Geometric discrepancy: 0.0882

The information below is about HL_5J7L_183

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7Q4K|1|BA|G|2027
7Q4K|1|BA|U|2028
7Q4K|1|BA|G|2029
7Q4K|1|BA|6MZ|2030
7Q4K|1|BA|A|2031
7Q4K|1|BA|G|2032
7Q4K|1|BA|A|2033
7Q4K|1|BA|U|2034
7Q4K|1|BA|G|2035
7Q4K|1|BA|C|2036

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BR

50S ribosomal protein L21