HL_7Q4K_107
3D structure
- PDB id
- 7Q4K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GA(PSU)UGAAAA(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 7Q4K|1|D3|U|33
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q4K_107 not in the Motif Atlas
- Homologous match to HL_5EL4_222
- Geometric discrepancy: 0.4842
- The information below is about HL_5EL4_222
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7Q4K|1|D3|G|30
7Q4K|1|D3|A|31
7Q4K|1|D3|PSU|32
7Q4K|1|D3|U|33
7Q4K|1|D3|G|34
7Q4K|1|D3|A|35
7Q4K|1|D3|A|36
7Q4K|1|D3|A|37
7Q4K|1|D3|A|38
7Q4K|1|D3|PSU|39
7Q4K|1|D3|C|40
Current chains
- Chain D3
- Phe-tRNA (E site)
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 30S ribosomal protein S7
- Chain AK
- 30S ribosomal protein S11
- Chain D2
- Transfer RNA; tRNA
- Chain D4
- MsrDL mRNA
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