HL_7QGN_012

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7QGN|1|0|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGN_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1255

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7QGN|1|0|G|462
7QGN|1|0|U|463
7QGN|1|0|U|464
7QGN|1|0|A|465
7QGN|1|0|A|466
7QGN|1|0|U|467
7QGN|1|0|A|468
7QGN|1|0|C|469
7QGN|1|0|C|470

Current chains

Chain 0

16S rRNA

Nearby chains