HL_7QGN_036
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- CAAGCGGUAAG
- Length
- 11 nucleotides
- Bulged bases
- 7QGN|1|M|C|16, 7QGN|1|M|G|17, 7QGN|1|M|G|18, 7QGN|1|M|U|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QGN_036 not in the Motif Atlas
- Homologous match to HL_1SER_001
- Geometric discrepancy: 0.4495
- The information below is about HL_1SER_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.3
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
7QGN|1|M|C|12
7QGN|1|M|A|13
7QGN|1|M|A|14
7QGN|1|M|G|15
7QGN|1|M|C|16
7QGN|1|M|G|17
7QGN|1|M|G|18
7QGN|1|M|U|19
7QGN|1|M|A|20
7QGN|1|M|A|21
7QGN|1|M|G|22
Current chains
- Chain M
- P-site tRNA
Nearby chains
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 50S ribosomal protein L5
Coloring options: