HL_7QGN_091

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7QGN|1|N|G|2250

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGN_091 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0954

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7QGN|1|N|C|2248
7QGN|1|N|U|2249
7QGN|1|N|G|2250
7QGN|1|N|G|2251
7QGN|1|N|G|2252
7QGN|1|N|G|2253
7QGN|1|N|C|2254
7QGN|1|N|G|2255
7QGN|1|N|G|2256

Current chains

Chain N

23S rRNA

Nearby chains

Chain M

Transfer RNA; tRNA

Chain Z

50S ribosomal protein L16

Chain j

50S ribosomal protein L27