HL_7QGN_112
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 7QGN|1|O|G|41
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QGN_112 not in the Motif Atlas
- Homologous match to HL_5J7L_215
- Geometric discrepancy: 0.1045
- The information below is about HL_5J7L_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7QGN|1|O|A|34
7QGN|1|O|C|35
7QGN|1|O|C|36
7QGN|1|O|C|37
7QGN|1|O|C|38
7QGN|1|O|A|39
7QGN|1|O|U|40
7QGN|1|O|G|41
7QGN|1|O|C|42
7QGN|1|O|C|43
7QGN|1|O|G|44
7QGN|1|O|A|45
7QGN|1|O|A|46
7QGN|1|O|C|47
7QGN|1|O|U|48
Current chains
- Chain O
- 5S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L31
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 50S ribosomal protein L5
- Chain b
- 50S ribosomal protein L18
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