HL_7QI4_033

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

7QI4|1|A|G|3016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI4_033 not in the Motif Atlas

Geometric match to HL_4WF9_057

Geometric discrepancy: 0.1088

The information below is about HL_4WF9_057

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7QI4|1|A|U|3015
7QI4|1|A|G|3016
7QI4|1|A|C|3017
7QI4|1|A|A|3018
7QI4|1|A|G|3019
7QI4|1|A|C|3020
7QI4|1|A|C|3021
7QI4|1|A|G|3022

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial