HL_7QI4_035

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI4_035 not in the Motif Atlas

Geometric match to HL_1U9S_004

Geometric discrepancy: 0.0779

The information below is about HL_1U9S_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

7QI4|1|A|A|3081
7QI4|1|A|G|3082
7QI4|1|A|U|3083
7QI4|1|A|A|3084
7QI4|1|A|A|3085
7QI4|1|A|U|3086

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Ax

Transfer RNA; tRNA

Chain D

39S ribosomal protein L2, mitochondrial