HL_7QI4_059

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UAACUAA

Length

7 nucleotides

Bulged bases

7QI4|1|AA|C|1525, 7QI4|1|AA|U|1526

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI4_059 not in the Motif Atlas

Geometric match to HL_5M3H_001

Geometric discrepancy: 0.2497

The information below is about HL_5M3H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7QI4|1|AA|U|1522
7QI4|1|AA|A|1523
7QI4|1|AA|A|1524
7QI4|1|AA|C|1525
7QI4|1|AA|U|1526
7QI4|1|AA|A|1527
7QI4|1|AA|A|1528

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AV

28S ribosomal protein S27, mitochondrial