HL_7QI5_057
3D structure
- PDB id
- 7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- AUGAAACUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QI5_057 not in the Motif Atlas
- Geometric match to HL_3F2X_001
- Geometric discrepancy: 0.1346
- The information below is about HL_3F2X_001
- Detailed Annotation
- T-loop with 2 bulged bases not stacked
- Broad Annotation
- T-loop
- Motif group
- HL_13999.5
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
7QI5|1|AA|A|1399
7QI5|1|AA|U|1400
7QI5|1|AA|G|1401
7QI5|1|AA|A|1402
7QI5|1|AA|A|1403
7QI5|1|AA|A|1404
7QI5|1|AA|C|1405
7QI5|1|AA|U|1406
7QI5|1|AA|U|1407
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
Coloring options: