HL_7QI5_065
3D structure
- PDB id
- 7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- ACUCAUAUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QI5_065 not in the Motif Atlas
- Geometric match to HL_4TUE_034
- Geometric discrepancy: 0.087
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7QI5|1|Ax|A|31
7QI5|1|Ax|C|32
7QI5|1|Ax|U|33
7QI5|1|Ax|C|34
7QI5|1|Ax|A|35
7QI5|1|Ax|U|36
7QI5|1|Ax|A|37
7QI5|1|Ax|U|38
7QI5|1|Ax|U|39
Current chains
- Chain Ax
- P/P-tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain Ay
- Transfer RNA; tRNA
- Chain Az
- mRNA
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