HL_7QI6_063

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

AUAAU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI6_063 not in the Motif Atlas

Geometric match to HL_7UQ6_001

Geometric discrepancy: 0.2999

The information below is about HL_7UQ6_001

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20490.1

Basepair signature

cWW-cWS-F

Number of instances in this motif group

13

Unit IDs

7QI6|1|Aw|A|53
7QI6|1|Aw|U|54
7QI6|1|Aw|A|55
7QI6|1|Aw|A|56
7QI6|1|Aw|U|61

Current chains

Chain Aw

A/P-tRNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial