HL_7QP7_018
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCCGAGCCG
- Length
- 9 nucleotides
- Bulged bases
- 7QP7|1|A|G|836, 7QP7|1|A|A|837
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP7_018 not in the Motif Atlas
- Homologous match to HL_8P9A_207
- Geometric discrepancy: 0.4635
- The information below is about HL_8P9A_207
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89167.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
7QP7|1|A|C|833
7QP7|1|A|C|834
7QP7|1|A|C|835
7QP7|1|A|G|836
7QP7|1|A|A|837
7QP7|1|A|G|838
7QP7|1|A|C|839
7QP7|1|A|C|840
7QP7|1|A|G|841
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 1
- Eukaryotic translation initiation factor 3 subunit B
- Chain C
- 40S ribosomal protein S4, X isoform
- Chain D
- 40S ribosomal protein S9
- Chain T
- 40S ribosomal protein S24
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