HL_7QP7_021

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QP7_021 not in the Motif Atlas

Geometric match to HL_4C7O_001

Geometric discrepancy: 0.1498

The information below is about HL_4C7O_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7QP7|1|A|C|994
7QP7|1|A|G|995
7QP7|1|A|A|996
7QP7|1|A|A|997
7QP7|1|A|A|998
7QP7|1|A|G|999

Current chains

Chain A

18S rRNA

Nearby chains

Chain I

40S ribosomal protein S13

Chain Q

40S ribosomal protein S26