3D structure

PDB id
7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human 48S initiation complex in closed state (h48S AUG closed)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UUAUUCCCAUGA
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QP7|1|A|U|1111
7QP7|1|A|U|1112
7QP7|1|A|A|1113
7QP7|1|A|U|1114
7QP7|1|A|U|1115
7QP7|1|A|C|1116
7QP7|1|A|C|1117
7QP7|1|A|C|1118
7QP7|1|A|A|1119
7QP7|1|A|U|1120
7QP7|1|A|G|1121
7QP7|1|A|A|1122

Current chains

Chain A
18S rRNA

Nearby chains

Chain H
40S ribosomal protein S27
Chain M
40S ribosomal protein S17
Chain O
40S ribosomal protein S3a
Chain u
Eukaryotic translation initiation factor 3 subunit A
Chain x
Eukaryotic translation initiation factor 3 subunit D
Chain y
Eukaryotic translation initiation factor 3 subunit C

Coloring options:

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