HL_7QP7_027
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUUGAUAGCU
- Length
- 10 nucleotides
- Bulged bases
- 7QP7|1|A|U|1300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP7_027 not in the Motif Atlas
- Geometric match to HL_5J7L_012
- Geometric discrepancy: 0.2659
- The information below is about HL_5J7L_012
- Detailed Annotation
- GNRA wlth extra near cWW
- Broad Annotation
- GNRA wlth extra near cWW
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7QP7|1|A|A|1295
7QP7|1|A|U|1296
7QP7|1|A|U|1297
7QP7|1|A|G|1298
7QP7|1|A|A|1299
7QP7|1|A|U|1300
7QP7|1|A|A|1301
7QP7|1|A|G|1302
7QP7|1|A|C|1303
7QP7|1|A|U|1304
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain b
- 40S ribosomal protein S15
- Chain i
- 40S ribosomal protein S29
- Chain k
- Ubiquitin-40S ribosomal protein S27a
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