HL_7QP7_032

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGGCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QP7_032 not in the Motif Atlas

Geometric match to HL_6UFG_004

Geometric discrepancy: 0.1554

The information below is about HL_6UFG_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7QP7|1|A|C|1565
7QP7|1|A|G|1566
7QP7|1|A|G|1567
7QP7|1|A|C|1568
7QP7|1|A|A|1569
7QP7|1|A|G|1570

Current chains

Chain A

18S rRNA

Nearby chains

Chain d

40S ribosomal protein S19

Chain f

40S ribosomal protein S18