HL_7QQ3_038

3D structure

PDB id

7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7QQ3|1|I|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QQ3_038 not in the Motif Atlas

Homologous match to HL_5J7L_171

Geometric discrepancy: 0.2468

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7QQ3|1|I|C|1533
7QQ3|1|I|U|1534
7QQ3|1|I|A|1535
7QQ3|1|I|C|1536
7QQ3|1|I|G|1537
7QQ3|1|I|G|1538

Current chains

Chain I

23S ribosomal RNA

Nearby chains