3D structure

PDB id
7QR3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Chimpanzee CPEB3 HDV-like ribozyme
Experimental method
X-RAY DIFFRACTION
Resolution
2.18 Å

Loop

Sequence
GUUCACGUC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_36427.1
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
37

Unit IDs

7QR3|1|C|G|19
7QR3|1|C|U|20
7QR3|1|C|U|21
7QR3|1|C|C|22
7QR3|1|C|A|23
7QR3|1|C|C|24
7QR3|1|C|G|25
7QR3|1|C|U|26
7QR3|1|C|C|27

Current chains

Chain C
chimpanzee CPEB3 ribozyme

Nearby chains

Chain A
U1 small nuclear ribonucleoprotein A
Chain D
chimpanzee CPEB3 ribozyme

Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.034 s