HL_7QR4_004
3D structure
- PDB id
- 7QR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human CPEB3 HDV-like ribozyme
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.83 Å
Loop
- Sequence
- CAUUGCACUCCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QR4_004 not in the Motif Atlas
- Geometric match to HL_7QR4_002
- Geometric discrepancy: 0.0002
- The information below is about HL_7QR4_002
- Detailed Annotation
- U1 small nuclear ribonucleoprotein A binding hairpin
- Broad Annotation
- No text annotation
- Motif group
- HL_36992.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7QR4|1|B|C|43||||4_555
7QR4|1|B|A|44||||4_555
7QR4|1|B|U|45||||4_555
7QR4|1|B|U|46||||4_555
7QR4|1|B|G|47||||4_555
7QR4|1|B|C|48||||4_555
7QR4|1|B|A|49||||4_555
7QR4|1|B|C|50||||4_555
7QR4|1|B|U|51||||4_555
7QR4|1|B|C|52||||4_555
7QR4|1|B|C|53||||4_555
7QR4|1|B|G|54||||4_555
Current chains
- Chain B
- RNA CPEB3 ribozyme
Nearby chains
- Chain A
- U1 small nuclear ribonucleoprotein A
Coloring options: