HL_7QR8_003
3D structure
- PDB id
- 7QR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SpCas9 bound to PTPRC off-target1 DNA substrate
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- UUGAAAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA with extra tWH
- Broad Annotation
- GNRA with extra tWH
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7QR8|1|A|U|71
7QR8|1|A|U|72
7QR8|1|A|G|73
7QR8|1|A|A|74
7QR8|1|A|A|75
7QR8|1|A|A|76
7QR8|1|A|A|77
7QR8|1|A|A|78
Current chains
- Chain A
- PTPRC sgRNA
Nearby chains
- Chain B
- CRISPR-associated endonuclease Cas9/Csn1
Coloring options: