HL_7QV1_025

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_025 not in the Motif Atlas

Homologous match to HL_4WF9_020

Geometric discrepancy: 0.1225

The information below is about HL_4WF9_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7QV1|1|V|C|675
7QV1|1|V|G|676
7QV1|1|V|A|677
7QV1|1|V|A|678
7QV1|1|V|A|679
7QV1|1|V|G|680

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain L

50S ribosomal protein L15