HL_7QV1_032

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAUAAGA

Length

8 nucleotides

Bulged bases

7QV1|1|V|U|1004, 7QV1|1|V|G|1007

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_032 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.1787

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7QV1|1|V|U|1001
7QV1|1|V|G|1002
7QV1|1|V|A|1003
7QV1|1|V|U|1004
7QV1|1|V|A|1005
7QV1|1|V|A|1006
7QV1|1|V|G|1007
7QV1|1|V|A|1008

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16