HL_7QV1_035

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

7QV1|1|V|A|1141

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_035 not in the Motif Atlas

Homologous match to HL_7A0S_029

Geometric discrepancy: 0.4605

The information below is about HL_7A0S_029

Detailed Annotation

GNRA related

Broad Annotation

T-loop

Motif group

HL_38635.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QV1|1|V|C|1138
7QV1|1|V|G|1139
7QV1|1|V|U|1140
7QV1|1|V|A|1141
7QV1|1|V|A|1142
7QV1|1|V|U|1143
7QV1|1|V|A|1144
7QV1|1|V|G|1145

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6