HL_7QV1_041

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAUUGGAUAUC

Length

12 nucleotides

Bulged bases

7QV1|1|V|U|1500, 7QV1|1|V|U|1501, 7QV1|1|V|A|1506, 7QV1|1|V|U|1507

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_041 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1681

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7QV1|1|V|G|1497
7QV1|1|V|U|1498
7QV1|1|V|A|1499
7QV1|1|V|U|1500
7QV1|1|V|U|1501
7QV1|1|V|G|1502
7QV1|1|V|G|1503
7QV1|1|V|A|1504
7QV1|1|V|U|1505
7QV1|1|V|A|1506
7QV1|1|V|U|1507
7QV1|1|V|C|1508

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17