HL_7QV1_054

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

7QV1|1|V|A|2059, 7QV1|1|V|A|2060, 7QV1|1|V|G|2061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_054 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1636

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

10

Unit IDs

7QV1|1|V|G|2056
7QV1|1|V|U|2057
7QV1|1|V|G|2058
7QV1|1|V|A|2059
7QV1|1|V|A|2060
7QV1|1|V|G|2061
7QV1|1|V|A|2062
7QV1|1|V|U|2063
7QV1|1|V|G|2064
7QV1|1|V|C|2065

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3