HL_7R4X_011

3D structure

PDB id

7R4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

UCUUUCGA

Length

8 nucleotides

Bulged bases

7R4X|1|2|U|541

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7R4X_011 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3952

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7R4X|1|2|U|538
7R4X|1|2|C|539
7R4X|1|2|U|540
7R4X|1|2|U|541
7R4X|1|2|U|542
7R4X|1|2|C|543
7R4X|1|2|G|544
7R4X|1|2|A|545

Current chains

Chain 2

18S ribosomal RNA

Nearby chains