HL_7R7A_043
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GGGAACGGGC
- Length
- 10 nucleotides
- Bulged bases
- 7R7A|1|1|G|2371, 7R7A|1|1|A|2372, 7R7A|1|1|A|2373, 7R7A|1|1|G|2376
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7R7A_043 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2616
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7R7A|1|1|G|2369
7R7A|1|1|G|2370
7R7A|1|1|G|2371
7R7A|1|1|A|2372
7R7A|1|1|A|2373
7R7A|1|1|C|2374
7R7A|1|1|G|2375
7R7A|1|1|G|2376
7R7A|1|1|G|2377
7R7A|1|1|C|2378
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain s
- Nuclear GTP-binding protein NUG1
Coloring options: