HL_7RQ8_186

3D structure

PDB id

7RQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

7RQ8|1|2a|U|202, 7RQ8|1|2a|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RQ8_186 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.5704

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7RQ8|1|2a|C|201
7RQ8|1|2a|U|202
7RQ8|1|2a|U|203
7RQ8|1|2a|U|204
7RQ8|1|2a|G|216

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains