3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
GGUGAGAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84085.2
Basepair signature
cWW-tSH-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7RQB|1|1A|G|712
7RQB|1|1A|G|713
7RQB|1|1A|U|714
7RQB|1|1A|G|715
7RQB|1|1A|A|716
7RQB|1|1A|G|717
7RQB|1|1A|A|718
7RQB|1|1A|C|719

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1D
50S ribosomal protein L2
Chain 1a
Small subunit ribosomal RNA; SSU rRNA
Chain 1o
30S ribosomal protein S15
Chain 1q
30S ribosomal protein S17

Coloring options:

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