3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
CGAUAACG
Length
8 nucleotides
Bulged bases
7RQB|1|1A|U|958, 7RQB|1|1A|C|961
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_35490.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
299

Unit IDs

7RQB|1|1A|C|955
7RQB|1|1A|G|956
7RQB|1|1A|A|957
7RQB|1|1A|U|958
7RQB|1|1A|A|959
7RQB|1|1A|A|960
7RQB|1|1A|C|961
7RQB|1|1A|G|962

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1B
5S ribosomal RNA; 5S rRNA
Chain 1Q
50S ribosomal protein L16

Coloring options:

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