3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
CUAAAAGGUAACG
Length
13 nucleotides
Bulged bases
7RQB|1|1A|A|2268, 7RQB|1|1A|C|2275
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_19870.6
Basepair signature
cWW-tSH-tHH-tWW-F-F-F
Number of instances in this motif group
7

Unit IDs

7RQB|1|1A|C|2264
7RQB|1|1A|U|2265
7RQB|1|1A|A|2266
7RQB|1|1A|A|2267
7RQB|1|1A|A|2268
7RQB|1|1A|A|2269
7RQB|1|1A|G|2270
7RQB|1|1A|G|2271
7RQB|1|1A|U|2272
7RQB|1|1A|A|2273
7RQB|1|1A|A|2274
7RQB|1|1A|C|2275
7RQB|1|1A|G|2276

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 10
50S ribosomal protein L27
Chain 1B
5S ribosomal RNA; 5S rRNA
Chain 1Q
50S ribosomal protein L16
Chain 1Z
50S ribosomal protein L25

Coloring options:

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