3D structure

PDB id
7RQB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.45 Å

Loop

Sequence
C(OMU)GUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RQB_062 not in the Motif Atlas
Homologous match to HL_8VTW_061
Geometric discrepancy: 0.1049
The information below is about HL_8VTW_061
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_36430.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7RQB|1|1A|C|2551
7RQB|1|1A|OMU|2552
7RQB|1|1A|G|2553
7RQB|1|1A|U|2554
7RQB|1|1A|U|2555
7RQB|1|1A|C|2556
7RQB|1|1A|G|2557

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1w
A-site Aminoacyl-tRNA Analog

Coloring options:


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