HL_7RQC_028

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7RQC|1|1A|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RQC_028 not in the Motif Atlas

Homologous match to HL_9DFE_027

Geometric discrepancy: 0.3246

The information below is about HL_9DFE_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQC|1|1A|C|1064
7RQC|1|1A|U|1065
7RQC|1|1A|U|1066
7RQC|1|1A|A|1067
7RQC|1|1A|G|1068
7RQC|1|1A|A|1069
7RQC|1|1A|A|1070
7RQC|1|1A|G|1071
7RQC|1|1A|C|1072
7RQC|1|1A|A|1073
7RQC|1|1A|G|1074

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1Q

50S ribosomal protein L16