HL_7RQD_073
3D structure
- PDB id
- 7RQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- 7RQD|1|1a|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RQD_073 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.083
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.2
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7RQD|1|1a|U|12
7RQD|1|1a|U|13
7RQD|1|1a|U|14
7RQD|1|1a|G|15
7RQD|1|1a|A|16
7RQD|1|1a|U|17
7RQD|1|1a|C|18
7RQD|1|1a|C|19
7RQD|1|1a|U|20
7RQD|1|1a|G|21
7RQD|1|1a|G|22
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1e
- 30S ribosomal protein S5
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