HL_7RQE_133

3D structure

PDB id

7RQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GGUGGCUUAGAAGCAGCCAUCC

Length

22 nucleotides

Bulged bases

7RQE|1|2A|A|1067, 7RQE|1|2A|G|1068

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQE|1|2A|G|1058
7RQE|1|2A|G|1059
7RQE|1|2A|U|1060
7RQE|1|2A|G|1062
7RQE|1|2A|G|1063
7RQE|1|2A|C|1064
7RQE|1|2A|U|1065
7RQE|1|2A|U|1066
7RQE|1|2A|A|1067
7RQE|1|2A|G|1068
7RQE|1|2A|A|1069
7RQE|1|2A|A|1070
7RQE|1|2A|G|1071
7RQE|1|2A|C|1072
7RQE|1|2A|A|1073
7RQE|1|2A|G|1074
7RQE|1|2A|C|1075
7RQE|1|2A|C|1076
7RQE|1|2A|A|1077
7RQE|1|2A|U|1078
7RQE|1|2A|C|1079
7RQE|1|2A|C|1080

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25