HL_7RR5_008

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UUGGAACA

Length

8 nucleotides

Bulged bases

7RR5|1|C1|C|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_008 not in the Motif Atlas

Homologous match to HL_8C3A_005

Geometric discrepancy: 0.1095

The information below is about HL_8C3A_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23932.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

40

Unit IDs

7RR5|1|C1|U|194
7RR5|1|C1|U|195
7RR5|1|C1|G|196
7RR5|1|C1|G|197
7RR5|1|C1|A|198
7RR5|1|C1|A|199
7RR5|1|C1|C|200
7RR5|1|C1|A|201

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LY

60S ribosomal protein L26-A

Chain Le

RPL32 isoform 1