3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7RR5_020 not in the Motif Atlas
Homologous match to HL_5TBW_017
Geometric discrepancy: 0.1742
The information below is about HL_5TBW_017
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

7RR5|1|C1|C|732
7RR5|1|C1|G|733
7RR5|1|C1|C|734
7RR5|1|C1|A|735
7RR5|1|C1|A|736
7RR5|1|C1|G|737

Current chains

Chain C1
25S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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