HL_7RR5_033

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

7RR5|1|C1|A|1407

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_033 not in the Motif Atlas

Homologous match to HL_8C3A_030

Geometric discrepancy: 0.1207

The information below is about HL_8C3A_030

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7RR5|1|C1|C|1403
7RR5|1|C1|G|1404
7RR5|1|C1|U|1405
7RR5|1|C1|A|1406
7RR5|1|C1|A|1407
7RR5|1|C1|G|1408

Current chains

Chain C1

25S rRNA

Nearby chains

Chain Le

RPL32 isoform 1