HL_7RR5_040

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

7RR5|1|C1|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_040 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.1516

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7RR5|1|C1|G|1680
7RR5|1|C1|U|1681
7RR5|1|C1|U|1682
7RR5|1|C1|A|1683
7RR5|1|C1|U|1684
7RR5|1|C1|C|1685
7RR5|1|C1|U|1686
7RR5|1|C1|U|1687
7RR5|1|C1|U|1688

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19-A

Chain LU

60S ribosomal protein L22-A