HL_7RR5_058
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7RR5|1|C1|G|2618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_058 not in the Motif Atlas
- Homologous match to HL_8C3A_055
- Geometric discrepancy: 0.1042
- The information below is about HL_8C3A_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7RR5|1|C1|C|2616
7RR5|1|C1|U|2617
7RR5|1|C1|G|2618
7RR5|1|C1|G|2619
7RR5|1|C1|G|2620
7RR5|1|C1|G|2621
7RR5|1|C1|C|2622
7RR5|1|C1|G|2623
7RR5|1|C1|G|2624
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain 5
- Eukaryotic translation initiation factor 5A
- Chain LI
- RPL10 isoform 1
- Chain Lb
- RPL29 isoform 1
- Chain P
- Transfer RNA; tRNA
Coloring options: