HL_7RR5_060

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_060 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.0926

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7RR5|1|C1|A|2673
7RR5|1|C1|A|2674
7RR5|1|C1|C|2675
7RR5|1|C1|A|2676
7RR5|1|C1|G|2677
7RR5|1|C1|A|2678
7RR5|1|C1|A|2679
7RR5|1|C1|A|2680
7RR5|1|C1|U|2681

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LJ

RPL11B isoform 1