HL_7RR5_067

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RR5_067 not in the Motif Atlas

Homologous match to HL_5TBW_063

Geometric discrepancy: 0.1683

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7RR5|1|C1|U|2920
7RR5|1|C1|U|2921
7RR5|1|C1|G|2922
7RR5|1|C1|U|2923
7RR5|1|C1|U|2924
7RR5|1|C1|C|2925
7RR5|1|C1|A|2926

Current chains

Chain C1

25S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA

Chain LB

RPL3 isoform 1