HL_7RR5_118
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CCAAUGGUCACG
- Length
- 12 nucleotides
- Bulged bases
- 7RR5|1|P|U|16, 7RR5|1|P|G|17, 7RR5|1|P|G|18, 7RR5|1|P|U|19, 7RR5|1|P|C|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_118 not in the Motif Atlas
- Homologous match to HL_1SER_001
- Geometric discrepancy: 0.4262
- The information below is about HL_1SER_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.3
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
7RR5|1|P|C|12
7RR5|1|P|C|13
7RR5|1|P|A|14
7RR5|1|P|A|15
7RR5|1|P|U|16
7RR5|1|P|G|17
7RR5|1|P|G|18
7RR5|1|P|U|19
7RR5|1|P|C|20
7RR5|1|P|A|21
7RR5|1|P|C|22
7RR5|1|P|G|23
Current chains
- Chain P
- P-tRNA
Nearby chains
- Chain 5
- Eukaryotic translation initiation factor 5A
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LJ
- RPL11B isoform 1
- Chain Lo
- 60S ribosomal protein L42-A
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