HL_7RR5_120
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GUUCAAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RR5_120 not in the Motif Atlas
- Homologous match to HL_1QTQ_003
- Geometric discrepancy: 0.1941
- The information below is about HL_1QTQ_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.2
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
7RR5|1|P|G|53
7RR5|1|P|U|54
7RR5|1|P|U|55
7RR5|1|P|C|56
7RR5|1|P|A|57
7RR5|1|P|A|58
7RR5|1|P|G|59
7RR5|1|P|U|60
7RR5|1|P|C|61
Current chains
- Chain P
- P-tRNA
Nearby chains
- Chain 5
- Eukaryotic translation initiation factor 5A
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LJ
- RPL11B isoform 1
- Chain Lo
- 60S ribosomal protein L42-A
Coloring options: