HL_7RYF_029

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UGAGAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYF_029 not in the Motif Atlas

Homologous match to HL_4WF9_031

Geometric discrepancy: 0.1949

The information below is about HL_4WF9_031

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7RYF|1|A|U|1217
7RYF|1|A|G|1218
7RYF|1|A|A|1219
7RYF|1|A|G|1220
7RYF|1|A|A|1221
7RYF|1|A|A|1222

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L20

Chain Q

50S ribosomal protein L21