HL_7RYF_038

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7RYF|1|A|A|1612, 7RYF|1|A|A|1614, 7RYF|1|A|A|1616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYF_038 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.1039

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

7RYF|1|A|C|1610
7RYF|1|A|G|1611
7RYF|1|A|A|1612
7RYF|1|A|C|1613
7RYF|1|A|A|1614
7RYF|1|A|C|1615
7RYF|1|A|A|1616
7RYF|1|A|G|1617

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain R

50S ribosomal protein L22