HL_7RYF_049
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7RYF|1|A|G|2246
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7RYF_049 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.112
- The information below is about HL_4WF9_049
- Detailed Annotation
- LSU P loop
- Broad Annotation
- LSU P loop
- Motif group
- HL_11974.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
7RYF|1|A|C|2244
7RYF|1|A|U|2245
7RYF|1|A|G|2246
7RYF|1|A|OMG|2247
7RYF|1|A|G|2248
7RYF|1|A|G|2249
7RYF|1|A|C|2250
7RYF|1|A|G|2251
7RYF|1|A|G|2252
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L27
- Chain v
- Transfer RNA; tRNA
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