HL_7RYF_104

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UACUUGUG

Length

8 nucleotides

Bulged bases

7RYF|1|A|C|1531, 7RYF|1|A|G|1534

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7RYF_104 not in the Motif Atlas

Geometric match to HL_5J7L_200

Geometric discrepancy: 0.3526

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7RYF|1|A|U|1529
7RYF|1|A|A|1530
7RYF|1|A|C|1531
7RYF|1|A|U|1532
7RYF|1|A|U|1533
7RYF|1|A|G|1534
7RYF|1|A|U|1535
7RYF|1|A|G|1536

Current chains

Chain A

23S ribosomal RNA

Nearby chains